Input/Output

Importing of topics bed files (outputs from pycistopic) and consensus regions bed file into Anndata format for topic regression or classification. Importing of bigwigs files and consensus region bed files into Anndata format for peak regression or classification.

import_bigwigs(bigwigs_folder, regions_file)	Import bigWig files and consensus regions BED file into AnnData format.
import_beds(beds_folder[, regions_file, ...])	Import beds and optionally consensus regions BED files into AnnData format.