crested.register_genome

crested.register_genome(genome)

Register a genome to be used throughout a session.

Once a genome is registered, all the functions in the package that require a genome will use it if not explicitly provided.

Parameters:

genome (Genome) – The Genome object to register.

Examples

>>> genome = Genome(
...     fasta="tests/data/hg38.fa",
...     chrom_sizes="tests/data/test.chrom.sizes",
... )
>>> register_genome(genome)
INFO Genome hg38 registered.