crested.tl.modisco.calculate_similarity_matrix

crested.tl.modisco.calculate_similarity_matrix#

crested.tl.modisco.calculate_similarity_matrix(all_patterns)#

Calculate the similarity matrix for the given patterns.

Parameters:

all_patterns (dict) – Dictionary containing pattern data. Each key is a pattern index, and each value is a dictionary with pattern information.

Return type:

ndarray

Returns:

A 2D numpy array containing the similarity values.