``tl.modisco``
====================================================================================================



.. automodule:: crested.tl.modisco

   
   
   


   
   
   

   
   
   

   
   
   .. rubric:: Functions

   .. autosummary::
      :toctree:
   
      calculate_mean_expression_per_cell_type
      calculate_similarity_matrix
      calculate_tomtom_similarity_per_pattern
      create_pattern_matrix
      create_pattern_tf_dict
      create_tf_ct_matrix
      find_pattern
      find_pattern_matches
      generate_html_paths
      generate_nucleotide_sequences
      get_pwms_from_modisco_file
      match_h5_files_to_classes
      pattern_similarity
      process_patterns
      read_motif_to_tf_file
      tfmodisco